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High level implementation of geometric multigrid solvers for finite element problems: Applications in atmospheric modelling

Mitchell, Lawrence; Müller, Eike Hermann

High level implementation of geometric multigrid solvers for finite element problems: Applications in atmospheric modelling Thumbnail


Authors

Lawrence Mitchell

Eike Hermann Müller



Abstract

The implementation of efficient multigrid preconditioners for elliptic partial differential equations (PDEs) is a challenge due to the complexity of the resulting algorithms and corresponding computer code. For sophisticated (mixed) finite element discretisations on unstructured grids an efficient implementation can be very time consuming and requires the programmer to have in-depth knowledge of the mathematical theory, parallel computing and optimisation techniques on manycore CPUs. In this paper we show how the development of bespoke multigrid preconditioners can be simplified significantly by using a framework which allows the expression of the each component of the algorithm at the correct abstraction level. Our approach (1) allows the expression of the finite element problem in a language which is close to the mathematical formulation of the problem, (2) guarantees the automatic generation and efficient execution of parallel optimised low-level computer code and (3) is flexible enough to support different abstraction levels and give the programmer control over details of the preconditioner. We use the composable abstractions of the Firedrake/PyOP2 package to demonstrate the efficiency of this approach for the solution of strongly anisotropic PDEs in atmospheric modelling. The weak formulation of the PDE is expressed in Unified Form Language (UFL) and the lower PyOP2 abstraction layer allows the manual design of computational kernels for a bespoke geometric multigrid preconditioner. We compare the performance of this preconditioner to a single-level method and hypre's BoomerAMG algorithm. The Firedrake/PyOP2 code is inherently parallel and we present a detailed performance analysis for a single node (24 cores) on the ARCHER supercomputer. Our implementation utilises a significant fraction of the available memory bandwidth and shows very good weak scaling on up to 6,144 compute cores.

Citation

Mitchell, L., & Müller, E. H. (2016). High level implementation of geometric multigrid solvers for finite element problems: Applications in atmospheric modelling. Journal of Computational Physics, 327, 1-18. https://doi.org/10.1016/j.jcp.2016.09.037

Journal Article Type Article
Acceptance Date Sep 16, 2016
Online Publication Date Sep 22, 2016
Publication Date Dec 15, 2016
Deposit Date Aug 1, 2018
Publicly Available Date Aug 2, 2018
Journal Journal of Computational Physics
Print ISSN 0021-9991
Publisher Elsevier
Peer Reviewed Peer Reviewed
Volume 327
Pages 1-18
DOI https://doi.org/10.1016/j.jcp.2016.09.037
Related Public URLs https://researchportal.bath.ac.uk/en/publications/high-level-implementation-of-geometric-multigrid-solvers-for-fini; https://arxiv.org/pdf/1605.00492.pdf

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