Murray, Charles D. and Weinzierl, Tobias (2021) 'Delayed approximate matrix assembly in multigrid with dynamic precisions.', Concurrency and computation : practice and experience., 33 (11). e5941.
Abstract
The accurate assembly of the system matrix is an important step in any code that solves partial differential equations on a mesh. We either explicitly set up a matrix, or we work in a matrix‐free environment where we have to be able to quickly return matrix entries upon demand. Either way, the construction can become costly due to nontrivial material parameters entering the equations, multigrid codes requiring cascades of matrices that depend upon each other, or dynamic adaptive mesh refinement that necessitates the recomputation of matrix entries or the whole equation system throughout the solve. We propose that these constructions can be performed concurrently with the multigrid cycles. Initial geometric matrices and low accuracy integrations kickstart the multigrid iterations, while improved assembly data is fed to the solver as and when it becomes available. The time to solution is improved as we eliminate an expensive preparation phase traditionally delaying the actual computation. We eliminate algorithmic latency. Furthermore, we desynchronize the assembly from the solution process. This anarchic increase in the concurrency level improves the scalability. Assembly routines are notoriously memory‐ and bandwidth‐demanding. As we work with iteratively improving operator accuracies, we finally propose the use of a hierarchical, lossy compression scheme such that the memory footprint is brought down aggressively where the system matrix entries carry little information or are not yet available with high accuracy.
Item Type: | Article |
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Full text: | (VoR) Version of Record Available under License - Creative Commons Attribution. Download PDF (Advance online version) (1606Kb) |
Status: | Peer-reviewed |
Publisher Web site: | https://doi.org/10.1002/cpe.5941 |
Publisher statement: | © 2020 The Authors. Concurrency and Computation: Practice and Experience published by John Wiley & Sons, Ltd. This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
Date accepted: | 09 June 2020 |
Date deposited: | 24 July 2020 |
Date of first online publication: | 22 July 2020 |
Date first made open access: | 24 July 2020 |
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