Samfass, Philipp and Weinzierl, Tobias and Hazelwood, Benjamin and Bader, Michael (2020) 'teaMPI---replication-based resiliency without the (performance) pain.', in High Performance Computing: 35th International Conference, ISC High Performance 2020, Frankfurt/Main, Germany, June 22–25, 2020 ; proceedings. , pp. 455-473. Lecture Notes in Computer Science., 12151
Abstract
In an era where we can not afford to checkpoint frequently, replication is a generic way forward to construct numerical simulations that can continue to run even if hardware parts fail. Yet, replication often is not employed on larger scales, as naïvely mirroring a computation once effectively halves the machine size, and as keeping replicated simulations consistent with each other is not trivial. We demonstrate for the ExaHyPE engine—a task-based solver for hyperbolic equation systems—that it is possible to realise resiliency without major code changes on the user side, while we introduce a novel algorithmic idea where replication reduces the time-to-solution. The redundant CPU cycles are not burned “for nothing”. Our work employs a weakly consistent data model where replicas run independently yet inform each other through heartbeat messages whether they are still up and running. Our key performance idea is to let the tasks of the replicated simulations share some of their outcomes, while we shuffle the actual task execution order per replica. This way, replicated ranks can skip some local computations and automatically start to synchronise with each other. Our experiments with a production-level seismic wave-equation solver provide evidence that this novel concept has the potential to make replication affordable for large-scale simulations in high-performance computing.
Item Type: | Book chapter |
---|---|
Full text: | (AM) Accepted Manuscript Download PDF (1552Kb) |
Status: | Peer-reviewed |
Publisher Web site: | https://doi.org/10.1007/978-3-030-50743-5_23 |
Publisher statement: | This a post-peer-review, pre-copyedit version of a chapter published in High Performance Computing: 35th International Conference, ISC High Performance 2020, Frankfurt/Main, Germany, June 22–25, 2020 ; proceedings. The final authenticated version is available online at: https://doi.org/10.1007/978-3-030-50743-5_23 |
Date accepted: | 15 May 2020 |
Date deposited: | 10 September 2020 |
Date of first online publication: | 15 June 2020 |
Date first made open access: | 15 June 2021 |
Save or Share this output
Export: | |
Look up in GoogleScholar |